PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34558.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 309aa MW: 35540.8 Da PI: 6.6147

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34558.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.9	1.5e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 +g W++eEde+l+d + + G g+W+++++ g + R++k+c++rw +yl RWW34558.1 14 KGLWSPEEDEKLYDHIIRCGIGCWSSVPKLAGrLDRCGKSCRLRWINYL 62 678********************************************97 PP
2	Myb_DNA-binding	49.4	1.1e-15	68	112	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E++ ++++++ +G++ W+ Ia+ ++ gRt++++k++w++ RWW34558.1 68 RGNFSQQEEDTIIRLHEIMGNR-WSHIASQLP-GRTDNEIKNYWNSC 112 89******************.*****.*********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MGRHSCCLKQ KIRKGLWSPE EDEKLYDHII RCGIGCWSSV PKLAGRLDRC GKSCRLRWIN 60 YLRPDLKRGN FSQQEEDTII RLHEIMGNRW SHIASQLPGR TDNEIKNYWN SCLKKKLRKR 120 GIDPSSHKPL SEIAAQEEGT RTHCSNTGAA FEQLQLHPVF DTFPLIEIRT CLDSVENNVS 180 IYGQFHQTFE PVGQDECLVN SEICDHGSAL DNIGQGDSSI NSSNWNCNIG SEMKSVFRDE 240 DLNWVSQSKV ETPAHMQMND EKTHEHKFNH WQEKNTYPIP VRSLSHDLSE TCFSVSREAL 300 ESEFNVNFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	9e-75	MYB family protein