PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34521.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 549aa MW: 61335.2 Da PI: 6.8119

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34521.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.8	9.9e-07	321	342	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H RWW34521.1 321 FCAICGKGFKRDANLRMHMRGH 342 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MSQLSGTSVE ASCGRRETLG FSVPHFVVHE IFCSVAVKKK KKKKKKGEAE RAMDLQVKER 60 GLRTQKGNLL TSAPVDRKTT LEVAMDPKQI PTFEACSSMS SQCRNLNQNQ RVTEFDAGET 120 ERSLPKFSSH LDNSFHQSNQ AQQVAMNWDP RAVLNSLDIL GHKIHQIQDV VRSTLSNERQ 180 LSMQPNEFAA QQQLINTDLT CIIIEIISTA GTLLPLIKNA LSSGINSPGQ IGGIANSASD 240 LDIVDMLRQN DSLLSEGAKD SEYEELIKGL SDWDDEGLKP ISTEDDVKDN EDGVSGENLP 300 LGSYEVLQLE KEEILAPHTH FCAICGKGFK RDANLRMHMR GHGDEYKSPS ALAKPRKEES 360 SEPVHIKRYS CPFIGCKRNK EHKNFQPLKT ILCVKNHYKR SHCDKSYTCR RCNSKKFSVM 420 ADLKTHEKHC GSNKWLCSCG TTFSRKDKLF GHIALFQGHT PALSMDEVKS QGMLDQLQSD 480 EVMAKKEDMD YIISGNVNED TNFSLLKGAD DDLGYFSSMN FDSFTFGGID GLQQPSSFDT 540 SESLFSFHK

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MSQLSGTSVE ASCGRRETLG FSVPHFVVHE IFCSVAVKKK KKKKKKGEAE RAMDLQVKER  60
GLRTQKGNLL TSAPVDRKTT LEVAMDPKQI PTFEACSSMS SQCRNLNQNQ RVTEFDAGET  120
ERSLPKFSSH LDNSFHQSNQ AQQVAMNWDP RAVLNSLDIL GHKIHQIQDV VRSTLSNERQ  180
LSMQPNEFAA QQQLINTDLT CIIIEIISTA GTLLPLIKNA LSSGINSPGQ IGGIANSASD  240
LDIVDMLRQN DSLLSEGAKD SEYEELIKGL SDWDDEGLKP ISTEDDVKDN EDGVSGENLP  300
LGSYEVLQLE KEEILAPHTH FCAICGKGFK RDANLRMHMR GHGDEYKSPS ALAKPRKEES  360
SEPVHIKRYS CPFIGCKRNK EHKNFQPLKT ILCVKNHYKR SHCDKSYTCR RCNSKKFSVM  420
ADLKTHEKHC GSNKWLCSCG TTFSRKDKLF GHIALFQGHT PALSMDEVKS QGMLDQLQSD  480
EVMAKKEDMD YIISGNVNED TNFSLLKGAD DDLGYFSSMN FDSFTFGGID GLQQPSSFDT  540
SESLFSFHK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	38	44	KKKKKKK
2	38	46	KKKKKKKKK
3	39	45	KKKKKKK
4	40	46	KKKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-144	C2H2 family protein