PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW34083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 256aa MW: 27588 Da PI: 5.1494 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 38.4 | 2.4e-12 | 102 | 142 | 22 | 59 |
EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 rsY+rCt++ gC++ ++v++s++dp++ ++tY geH+++ RWW34083.1 102 RSYFRCTHKqdqGCMAIRQVQKSQDDPSTYIVTYFGEHTCK 142 9*******99999**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MSSPTKVAAS SVADRAAVQS LIRIRETAAH LGVLLRPVFL EHAAAKSTFD ELMDSVSRSL 60 TLAAFEETAS VAVTGEGQLR EISGGKSKIS SVGERRRVCR RRSYFRCTHK QDQGCMAIRQ 120 VQKSQDDPST YIVTYFGEHT CKSPSMAPQV IISALDSSRL ISFGADSEKI TRQAPPPSLE 180 QECDEEVLSN LTTVSLSAAA TSNPAVAAPV APLAGHDHGD VTSGFQAHTS SVDMEFMEGL 240 LEFESLLDVD TDCFFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22570.1 | 1e-09 | WRKY family protein |