PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34015.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 340aa MW: 36810 Da PI: 8.0132

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	28.6	3.9e-09	69	122	7	55
DUF260 7 vlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeere 55 vlr++C +dC ++p++ p++q++++ +++k++G++ +++l++a pe+ r+ RWW34015.1 69 VLRKGCCDDCSIRPCLqwirnPESQANATVFLAKFYGRAGLMNLINAGPEHLRP 122 89**********************************************999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MPRAEMPFTK DLDPFPCLAS CVATSLPLFP VRKREESGAE VDSQLQWTRR RKSAESRRKA 60 SRCFLYFTVL RKGCCDDCSI RPCLQWIRNP ESQANATVFL AKFYGRAGLM NLINAGPEHL 120 RPGNPLTRVL LVFFLIASCL HADSSLWFVL WSSYIPIPTL RGLCQAAVEA VLKGSPIVQI 180 PSETAAATPV PPLKAYDIRH VAKDAELHKV NKSRTRLKRS GAKPRPSPTP LIEPGEQPEP 240 AGADLSHEST ASHASQPNTA AAGGGDGDGR ENESVFSADA ASHVSQGELS PAEEGEVGLE 300 LTLGLRPDRA IRPAGDARCD VSRLNADACK VDLCLQLPVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	32	52	RKREESGAEVDSQLQWTRRRK
2	48	53	TRRRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02550.1	1e-47	LBD family protein