PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW33906.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YC | ||||||||
Protein Properties | Length: 218aa MW: 24214.6 Da PI: 6.0278 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 173.7 | 1.9e-54 | 24 | 126 | 1 | 100 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw+++ ie+atdfknh+lPlarikki+kadedv+misaeaPvl++kacelfilelt+rswlhaeenkrrtl+k+diaaa++rt+ifdflvdiv RWW33906.1 24 QLEMFWNHRrqeIEHATDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAISRTEIFDFLVDIV 122 799***9876679************************************************************************************** PP NF-YC 97 prde 100 p++e RWW33906.1 123 PKEE 126 **97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MDNQQLHSYP PAPFHHLLQQ LHQQLEMFWN HRRQEIEHAT DFKNHQLPLA RIKKIMKADE 60 DVRMISAEAP VLFAKACELF ILELTIRSWL HAEENKRRTL QKNDIAAAIS RTEIFDFLVD 120 IVPKEEEVKE EGLGLAGGGG AGGEAAGVPY YYPPMGQPAP PRVMVGQPAV AGIDPSMYAK 180 QPAQAWQPMW HQGLSEDGSG QSLDGPGYAA PPPPPASR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 103 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 5e-75 | NF-YC family protein |