PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW33879.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 260aa MW: 29605.5 Da PI: 7.5722 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.7 | 6.4e-19 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed++l ++v+ +G g+W++ ar+ g++Rt+k+c++rw++yl RWW33879.1 23 RGPWTVDEDLILMNYVTTHGEGRWNSLARCAGLRRTGKSCRLRWLNYL 70 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.9 | 9.7e-18 | 76 | 119 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+++++ +lG++ W++Ia++++ gRt++++k++w++ RWW33879.1 76 RGNITPEEQLLILELHSRLGNR-WSKIAQHLP-GRTDNEIKNYWRT 119 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MELHGRPCSS ATRPSDEGMA LRRGPWTVDE DLILMNYVTT HGEGRWNSLA RCAGLRRTGK 60 SCRLRWLNYL RPDVRRGNIT PEEQLLILEL HSRLGNRWSK IAQHLPGRTD NEIKNYWRTR 120 VQKHAKQLRC DVNSKQFKDI MRYIWMPRLV ERIREASISS FAAMHQNAAA PLAPMQPVHP 180 IAQPAPANTT DSLFSSPPVS ESFTGSRETQ AGDDTAVDWM QEALLPSPGG YECPELPDLD 240 HGGWGESLWT VDDIWLQQQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 6e-82 | MYB family protein |