PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW33836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | CO-like | ||||||||
Protein Properties | Length: 180aa MW: 19455 Da PI: 6.9016 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 26.4 | 1.5e-08 | 14 | 57 | 4 | 41 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 r C+ + + + + +C+ + lC+ C ++H+ H +vp RWW33836.1 14 RACESCRSAPCTVYCRADAAALCAACDASIHSAnllarrHHRVP 57 67*****************************6689999977776 PP | |||||||
2 | CCT | 60 | 7.8e-21 | 119 | 153 | 10 | 44 |
CCT 10 eKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 eKrktR+FeK+irY+sRKa+Ae+RpR+KGrF+k++ RWW33836.1 119 EKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKKS 153 9********************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 180 aa Download sequence |
MLKVEESSGW AVPRACESCR SAPCTVYCRA DAAALCAACD ASIHSANLLA RRHHRVPLLP 60 DLAGGGLVVR PGLSAAYHVG VPAGAGEKDG DEEAAAWLLF DDAQGGGEEA DEFLDLVEEK 120 RKTRRFEKTI RYASRKAYAE TRPRIKGRFA KKSDVEIEVD QMFSTAAVLA NSRFGVVPSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G15850.1 | 1e-21 | CO-like family protein |