PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW33777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 136aa MW: 15314.7 Da PI: 11.6296 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.3 | 3.6e-27 | 77 | 126 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien++ rqvtfskRr+g+lKKA+EL +LCdaev v++fs tg+ly+y+s RWW33777.1 77 RIENSTSRQVTFSKRRKGLLKKAKELAILCDAEVGVVVFSATGRLYDYAS 126 8***********************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
MGALSAHMRW RGGGGGGERF PPQEPPAPTQ NLPPPPSPAV SQHLKPSSPT EPYIWFLEVR 60 RRRRRRSMGR GKIAICRIEN STSRQVTFSK RRKGLLKKAK ELAILCDAEV GVVVFSATGR 120 LYDYASSRYS FFLLWT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 60 | 65 | RRRRRR |
2 | 60 | 66 | RRRRRRR |
3 | 60 | 100 | RRRRRRRSMGRGKIAICRIENSTSRQVTFSKRRKGLLKKAK |
4 | 61 | 66 | RRRRRR |
5 | 61 | 101 | RRRRRRRSMGRGKIAICRIENSTSRQVTFSKRRKGLLKKAK |
6 | 62 | 102 | RRRRRRRSMGRGKIAICRIENSTSRQVTFSKRRKGLLKKAK |
7 | 63 | 103 | RRRRRRRSMGRGKIAICRIENSTSRQVTFSKRRKGLLKKAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.2 | 1e-33 | MIKC_MADS family protein |