PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW33491.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 353aa MW: 38747.1 Da PI: 7.9583

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW33491.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	89.4	4.4e-28	18	141	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT.TEEE.---SSBTTTT.....................X CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY.gFkk.vkdeekksks.....................k 75 F+ k+ye+++d++++ li+w + +nsf+v ++++f++ +Lp+yFkhsnfaSFvRQLn+Y g + v+ + ++ s + RWW33491.1 18 FVVKTYEMVNDPRTDCLIRWGKGNNSFLVGNPSDFSQFLLPTYFKHSNFASFVRQLNTYvGVASsVSLPAGDP-SkshlllimsvfyccvqgfrkvD 113 9********************************************************54443033333333.35899999999988887776544 PP TTSEEEEESXXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 76 ekiweFkhksFkkgkkellekikrkkse 103 ++ weF+h+ F +g+ +ll +i r++++ RWW33491.1 114 PDRWEFAHHLFLRGQIHLLPHIIRRSKK 141 9*********************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MEGFRNTSVG YQVQAAPFVV KTYEMVNDPR TDCLIRWGKG NNSFLVGNPS DFSQFLLPTY 60 FKHSNFASFV RQLNTYVGVA SSVSLPAGDP SKSHLLLIMS VFYCCVQGFR KVDPDRWEFA 120 HHLFLRGQIH LLPHIIRRSK KSHVGLCAGS SSSRSGETKG DVEGEAEKTL LQELYRLRQE 180 QRAIDEELQV MSRRLQATER RPHQMMSFLI KMAEDPESLS GLVISKKQQS AAAKKRRLAA 240 AAHAINDGVF LLPSLLVPGT EQTVIEPFGT GSDRMSIEEV KPFAFVPDVS VIHSYDAELG 300 SLAAAPEASI IGSNPASGIS FLPDFALSTR SSSSETTTAA AAFPFSLLGH GFC

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MEGFRNTSVG YQVQAAPFVV KTYEMVNDPR TDCLIRWGKG NNSFLVGNPS DFSQFLLPTY  60
FKHSNFASFV RQLNTYVGVA SSVSLPAGDP SKSHLLLIMS VFYCCVQGFR KVDPDRWEFA  120
HHLFLRGQIH LLPHIIRRSK KSHVGLCAGS SSSRSGETKG DVEGEAEKTL LQELYRLRQE  180
QRAIDEELQV MSRRLQATER RPHQMMSFLI KMAEDPESLS GLVISKKQQS AAAKKRRLAA  240
AAHAINDGVF LLPSLLVPGT EQTVIEPFGT GSDRMSIEEV KPFAFVPDVS VIHSYDAELG  300
SLAAAPEASI IGSNPASGIS FLPDFALSTR SSSSETTTAA AAFPFSLLGH GFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24520.1	4e-51	HSF family protein