PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW33306.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 206aa MW: 22880 Da PI: 8.6076 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 133.2 | 1e-41 | 8 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaC++lrrkC+++Cv+apyfp +qp kf vh++FGasnv kll +l++ +reda++sl+yeAear++dPvyG+vg+i lq++l+q++ +l +++ RWW33306.1 8 PCAACRFLRRKCTPGCVFAPYFPPDQPMKFTSVHRVFGASNVAKLLGELSPWQREDAVNSLAYEAEARLHDPVYGCVGHICFLQRKLHQVQRDLYNARK 106 7********************************************************************************************998887 PP DUF260 100 e 100 e RWW33306.1 107 E 107 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MSAASSSPCA ACRFLRRKCT PGCVFAPYFP PDQPMKFTSV HRVFGASNVA KLLGELSPWQ 60 REDAVNSLAY EAEARLHDPV YGCVGHICFL QRKLHQVQRD LYNARKELSA YLSAPIADPH 120 HQQPQAASPS SHQQILLHEL QQQMAAVQQI AANRERDNQQ EMSRFSTVFQ MAGGATMAAT 180 TGLPALLPPR PSEGVFSLQQ QHNERK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66870.1 | 2e-47 | LBD family protein |