PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW33199.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 309aa MW: 34471.1 Da PI: 7.681

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW33199.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	37.8	3.2e-12	173	202	27	56
HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 27 aeereeLAkklgLterqVkvWFqNrRakek 56 ++++ LAk+l+L rqV vWFqNrRa+ k RWW33199.1 173 QRQKLALAKQLNLRPRQVEVWFQNRRARTK 202 5677889*********************98 PP
2	HD-ZIP_I/II	89.9	3e-29	169	238	22	92
HD-ZIP_I/II 22 ekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 + L +++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++ +l+een+ L+ke +eLr +lk RWW33199.1 169 DDLFQRQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCRTLTEENRCLQKEAAELR-ALK 238 468899************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MEQGLALGMG LDVGRREEEE AASADEEDGE VRWSVEPAVP LKLLPLLPVP RQPSPPLLRF 60 PSSTATKEAE EASSSSPNRA VSSFRTGFSA QRGSAERGGV AERASSILSD EEENGLAKKK 120 LRLSKEQSAF LEESFKEHKT LNPVKDLENT NCIKITNFDE MIEFIYKCDD LFQRQKLALA 180 KQLNLRPRQV EVWFQNRRAR TKLKQTEVDC EYLKRCCRTL TEENRCLQKE AAELRALKTT 240 HPFYMHLPAT TLSMCPSCER VASTPATAAA DHRPTSFAAL FSKPTPAAPR QPPDNFRPQP 300 PAATGHSCT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	197	205	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-67	HD-ZIP family protein