PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW33164.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 243aa    MW: 26593.8 Da    PI: 7.2027
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW33164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260115.33.8e-36796189
      DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89
                +C aCk+lrrkC+k+Cv+apyf+++q +++fa++hk+FGasn +k+l +lp  +r++a+ ++ yeA+ar++dPvyG+v++i++lqqq+++
  RWW33164.1  7 PCGACKFLRRKCVKGCVFAPYFCHDQgAASFAAIHKVFGASNFSKILMHLPVADRSEAAVTVSYEAQARLQDPVYGCVAHIFALQQQVSN 96
                7*************************89***********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MTGFGSPCGA CKFLRRKCVK GCVFAPYFCH DQGAASFAAI HKVFGASNFS KILMHLPVAD  60
RSEAAVTVSY EAQARLQDPV YGCVAHIFAL QQQVSNPVDP TRRIHRRQQL WDSPAFASLD  120
PQVVNLQAQL ASLRAQAAQG LGSSTAADRT PREDKPPPYQ QDNQSFFRTA DGRTLPPFSS  180
TPSMDLDTVV NSRHYDVGDE RISFDDGSFA MASPGMQASS WTSAYHHDME DLQSVALAYL  240
GRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.12e-55LBD family protein