PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW33073.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 279aa MW: 31237.8 Da PI: 6.1713 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.5 | 6.5e-18 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd lv++++ +G g+W++ ar+ g++Rt+k+c++rw++yl RWW33073.1 23 RGPWTVEEDVVLVNYIAVHGEGRWNSLARCAGLRRTGKSCRLRWLNYL 70 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.3 | 3.1e-17 | 76 | 119 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ RWW33073.1 76 RGNITPEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MEFHERTSGS AIPPSEEEQD LRRGPWTVEE DVVLVNYIAV HGEGRWNSLA RCAGLRRTGK 60 SCRLRWLNYL RPDVRRGNIT PEEQLLILEL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR 120 VQKHAKQLKC DVNSKQFKDV MRYLWMPRLV ERIRAASGNS TAAPATSDRP EDPAAELARV 180 KLSSETSSAA GSSSSDSLGM HHFSPPPVSD GFPAASIQGG EDNSGDVIVP ADLTTGCWSE 240 SLPSSSSGGY ADLGLPDLDQ GVWWDDLWSA ENIWLQQQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 7e-86 | MYB family protein |