PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW32664.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | GATA | ||||||||
Protein Properties | Length: 129aa MW: 14447.2 Da PI: 10.8906 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 25.9 | 1.4e-08 | 4 | 24 | 1 | 21 |
GATA 1 CsnCgttkTplWRrgpdgnkt 21 C C+tt TplWR gp+g+k RWW32664.1 4 CGVCRTTRTPLWRAGPSGPKV 24 889****************95 PP | |||||||
2 | GATA | 23.3 | 9.1e-08 | 50 | 64 | 21 | 35 |
GATA 21 tLCnaCGlyyrkkgl 35 +LCnaCG++yrk+++ RWW32664.1 50 SLCNACGIRYRKNRR 64 5***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MKSCGVCRTT RTPLWRAGPS GPKVLIDLVP FLDKPLCSVD LLIPVVRFQS LCNACGIRYR 60 KNRRVAAPGS KKEKIEMGAP LKLRMLGLWE RRSTIQKQSR RMGWSRSMLG EEEEAAVLLM 120 ALSSGLLYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 7e-14 | GATA family protein |