PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW32523.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 158aa    MW: 18403.2 Da    PI: 10.2337
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW32523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.87.9e-3053103151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 krienk+nrqvtf+kRrng+lKKA+ELS+LCdaeva iifss+g+l+e++s
  RWW32523.1  53 KRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVAAIIFSSRGRLFEFCS 103
                 79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MRKAFAERED RTLCYEVFLQ PHFFHYVESW KKRESWERRS VYVVMGRGRV ELKRIENKIN  60
RQVTFAKRRN GLLKKAYELS ILCDAEVAAI IFSSRGRLFE FCSSSRYVRP TATPLDSTES  120
RQENSSPSLS SLPPLLRSLC PFFPQFLVTA PKDSCPKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.36e-36MIKC_MADS family protein