PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW32516.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 283aa MW: 31137.4 Da PI: 9.2745 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 281.9 | 3e-86 | 1 | 283 | 1 | 301 |
GAGA_bind 1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdakirernlalsekkaavaerd.........maflqrdkalaernkalverdnkllalllven 89 mdddg + rn++y++++ lk + gl+ mss+a +++ + l +++a+++r+ m+ rn+ + r+n +l++l++++ RWW32516.1 1 MDDDGGMGmRNWAYFDQT--LKGDSGLHPMSSMAAEYGAPKPSFL----PNGAFHRREcfipeqpdrMDI-T-------RNEWINLRENDVLHMLPMND 85 999999999*******99..*************988888888877....999999999544444444444.4.......5555666**********888 PP GAGA_bind 90 slasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesadersk 188 ++ + +v++g++s ++q ++ + +e +k+ + + ++ + +k+++ r+++ k++k k+ kk +s k+++++++ ++ + RWW32516.1 86 CSS--AMGDAGVSHGAHSFSMMQS--------TPLPPPEGDKI--TAVDDELGKDVPQKRSQPRAQTCPHKASKPKRLKKVA-VS-KDESSSRMGHEGR 170 633..2234566666666666665........44443344433..3444555555555555555677778888888888844.33.333344445789* PP GAGA_bind 189 aekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkd 287 + ++s l++ng++lD s++P+P+CsCtG+++qCY+WG+GGWqSaCCtt iS+yPLP+stkrrgaRiagrKmSqgafkk+L+ Laa Gy+ls p+DLk RWW32516.1 171 NLRQSSALNINGIDLDVSNIPTPLCSCTGMPHQCYRWGAGGWQSACCTTGISTYPLPMSTKRRGARIAGRKMSQGAFKKVLANLAAKGYNLSDPIDLKP 269 *************************************************************************************************** PP GAGA_bind 288 hWAkHGtnkfvtir 301 +WAkHGtnkfvtir RWW32516.1 270 YWAKHGTNKFVTIR 283 *************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MDDDGGMGMR NWAYFDQTLK GDSGLHPMSS MAAEYGAPKP SFLPNGAFHR RECFIPEQPD 60 RMDITRNEWI NLRENDVLHM LPMNDCSSAM GDAGVSHGAH SFSMMQSTPL PPPEGDKITA 120 VDDELGKDVP QKRSQPRAQT CPHKASKPKR LKKVAVSKDE SSSRMGHEGR NLRQSSALNI 180 NGIDLDVSNI PTPLCSCTGM PHQCYRWGAG GWQSACCTTG ISTYPLPMST KRRGARIAGR 240 KMSQGAFKKV LANLAAKGYN LSDPIDLKPY WAKHGTNKFV TIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01930.1 | 1e-68 | BBR-BPC family protein |