PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW32109.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 237aa    MW: 26181.9 Da    PI: 7.011
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW32109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26063.36.1e-204188148
      DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllka 48
                +CaaCk+lrr+Ca++Cvlapyfp ++p kf  +h++FGasnv+kll+ 
  RWW32109.1 41 PCAACKILRRRCADNCVLAPYFPPTEPLKFTTAHRVFGASNVIKLLQV 88
                7********************************************985 PP

2DUF26056.86.5e-1811617541100
      DUF260  41 nvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                 n ++  ++lpe++r da+ss+vyeA+ar+rdPvyG+++ + +lq+q+++l+a+la++k+e
  RWW32109.1 116 NWIRHTQDLPENQRADAVSSMVYEAKARIRDPVYGCTAAVCQLQKQVDELQAQLARAKAE 175
                 6678899************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MDSSDTTTTG FHHVSSSPSS SPISSPPYLP ATPTTVVIHS PCAACKILRR RCADNCVLAP  60
YFPPTEPLKF TTAHRVFGAS NVIKLLQVNC RRLSLPHKHH AEVSFCLYVY VLLHFNWIRH  120
TQDLPENQRA DAVSSMVYEA KARIRDPVYG CTAAVCQLQK QVDELQAQLA RAKAELTNLQ  180
AQHGNLLALI CMEMARTQQD CAPQFVSGAL AASPCMFQSD ADFVDEISQG LVWDEPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.11e-56LBD family protein