PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW32109.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 237aa MW: 26181.9 Da PI: 7.011 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 63.3 | 6.1e-20 | 41 | 88 | 1 | 48 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllka 48 +CaaCk+lrr+Ca++Cvlapyfp ++p kf +h++FGasnv+kll+ RWW32109.1 41 PCAACKILRRRCADNCVLAPYFPPTEPLKFTTAHRVFGASNVIKLLQV 88 7********************************************985 PP | |||||||
2 | DUF260 | 56.8 | 6.5e-18 | 116 | 175 | 41 | 100 |
DUF260 41 nvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 n ++ ++lpe++r da+ss+vyeA+ar+rdPvyG+++ + +lq+q+++l+a+la++k+e RWW32109.1 116 NWIRHTQDLPENQRADAVSSMVYEAKARIRDPVYGCTAAVCQLQKQVDELQAQLARAKAE 175 6678899************************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MDSSDTTTTG FHHVSSSPSS SPISSPPYLP ATPTTVVIHS PCAACKILRR RCADNCVLAP 60 YFPPTEPLKF TTAHRVFGAS NVIKLLQVNC RRLSLPHKHH AEVSFCLYVY VLLHFNWIRH 120 TQDLPENQRA DAVSSMVYEA KARIRDPVYG CTAAVCQLQK QVDELQAQLA RAKAELTNLQ 180 AQHGNLLALI CMEMARTQQD CAPQFVSGAL AASPCMFQSD ADFVDEISQG LVWDEPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 1e-56 | LBD family protein |