PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW31480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 177aa MW: 19243.8 Da PI: 4.4118 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 48.9 | 1.9e-15 | 59 | 102 | 56 | 99 |
DUF260 56 damsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 da+ss+vyeA+ar+rdPvyG++gv+++lq+q+++l+a+lal+++ RWW31480.1 59 DAASSMVYEANARMRDPVYGCTGVVFQLQNQVSELQAQLALAQA 102 799*************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MLQKSCTRLG VSCVMWSPTP CLLVANVRTE TPDKLGWGCV DQKFDVDDGR RWLIICTLDA 60 ASSMVYEANA RMRDPVYGCT GVVFQLQNQV SELQAQLALA QAAVANLHAE NANLTALICE 120 RMSHALQETT AVTVDGTAAT PYVFQNDSST VTAATPYVLQ NDSFFLDGSS VPGYIRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28500.1 | 4e-12 | LBD family protein |