PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW31394.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 480aa MW: 53609.2 Da PI: 4.6594

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW31394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107	1.5e-33	54	144	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d +++ ++sw + +ns+vv+++ +fa+++LpkyFkhsnf+SFvRQLn+YgFkkv+ ++ weF+++ F +g+k+ll++i+ RWW31394.1 54 FLNKTYDMVDDLATDAIVSWGAGNNSLVVWNTPDFARHLLPKYFKHSNFSSFVRQLNTYGFKKVDPDR---------WEFANEGFLRGQKQLLKTIN 141 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k RWW31394.1 142 RRK 144 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MMSLELRSFY ISEICFRPLD RIEEGGGAME KCGGDGVAVA GAIPGMNGSG PPPFLNKTYD 60 MVDDLATDAI VSWGAGNNSL VVWNTPDFAR HLLPKYFKHS NFSSFVRQLN TYGFKKVDPD 120 RWEFANEGFL RGQKQLLKTI NRRKPCQSHG RRQPERTPPP DSSVTACVEV GKLGLEEDIE 180 GLKRGKNVLK QELGRLRQQQ LAADDQLETF VKRLEGMEQR QQQMTSFLGK AMRNPAFFTQ 240 FLQQGDANLR IHGVNKKRRL PNQGGRIVKY QSLINEAAKA MLRQILKMNT SPRIESWTNS 300 DDLLRHSSSF QSLYEGFEST SRVTLWEVAS DSGFDQSSAA AVAKTMETGE LTNIGVSSDI 360 PPPTDDLSIS DFSELLGVED PVLPPMPIEK DDFSAHTGIN FHDDDDDDEE EKLPGIVDAF 420 WEQFFTPTSV SGDADDVESS IIQEPKEIEQ STDGGLLHNS QHMDLLPQQM ELLLSSNIMI

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MMSLELRSFY ISEICFRPLD RIEEGGGAME KCGGDGVAVA GAIPGMNGSG PPPFLNKTYD  60
MVDDLATDAI VSWGAGNNSL VVWNTPDFAR HLLPKYFKHS NFSSFVRQLN TYGFKKVDPD  120
RWEFANEGFL RGQKQLLKTI NRRKPCQSHG RRQPERTPPP DSSVTACVEV GKLGLEEDIE  180
GLKRGKNVLK QELGRLRQQQ LAADDQLETF VKRLEGMEQR QQQMTSFLGK AMRNPAFFTQ  240
FLQQGDANLR IHGVNKKRRL PNQGGRIVKY QSLINEAAKA MLRQILKMNT SPRIESWTNS  300
DDLLRHSSSF QSLYEGFEST SRVTLWEVAS DSGFDQSSAA AVAKTMETGE LTNIGVSSDI  360
PPPTDDLSIS DFSELLGVED PVLPPMPIEK DDFSAHTGIN FHDDDDDDEE EKLPGIVDAF  420
WEQFFTPTSV SGDADDVESS IIQEPKEIEQ STDGGLLHNS QHMDLLPQQM ELLLSSNIMI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-104	HSF family protein