PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW30970.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ARF

Protein Properties

Length: 821aa MW: 91227.5 Da PI: 6.44

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW30970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74	1.8e-23	116	216	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae+ ++++ + +l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l RWW30970.1 116 FCKTLTASDTSTHGGFSVPRRSAEKVfppldfsQQPPVQ--ELVARDLHGNEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFI--WNENNQL 210 99***************************85545444..8**********************************************..7888888 PP EEEEE- CS B3 93 vvkvfr 98 +++++ RWW30970.1 211 LLGIRH 216 999886 PP
2	Auxin_resp	118.4	5.7e-39	242	325	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvG Rf+m fete+ss rr++Gt++g+sdldp rWpnS+WrsLk RWW30970.1 242 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGLRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSLK 325 79*******************************9789*****************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 821 aa Download sequence
SYTEETRCLN SELWHACAGP LVSLPAVGSR VVYFPQGHSE QVAVSTNKEI DSQIPNYPSL 60 PPQLICQLHN VTMHADVETD EVYAQMTLQP LSPQEQKDPY FPNDLGTSSK QPTNYFCKTL 120 TASDTSTHGG FSVPRRSAEK VFPPLDFSQQ PPVQELVARD LHGNEWKFRH IFRGQPKRHL 180 LTTGWSIFVS AKRLVAGDSV LFIWNENNQL LLGIRHANRP QMFMPSSVLS SDSMHIGLLA 240 AAAHAAATNS RFTIFYNPRA SPSEFVIPLA KYVKAVYHTR VSVGLRFRML FETEESSVRR 300 YMGTITGISD LDPARWPNSH WRSLKVGWDE STAGEKQPRV SLWEIEPLTT FPMYPSSFPL 360 GPKRPWPTGL PFFHGGNDDI SLNSPLMRLR DGGNPAIQSL NFRGIGVTPW MQPRLDALML 420 GLQPDMYQAM TTGVLQEMRT IDPTKQVSPA MLQFQQPQNS ANISTPTLPS PNQSQLLQHH 480 LQWGHSFAQQ GQQHQKIWSG YEEVPYVASN LLQLSSSSQS QSTTLHMISP SSQLKDFPDS 540 NGNSVSASNA SPLHGIFQQI SSEETSQLSL PKYGQPEQLG ATQPNISLYS VMLPPFPGKE 600 CSASRDGNMD TQNQHLFGVN VDSSILVQNG IPSLNTGVTE TCSTNLYATC NLLSSSGNNF 660 AVNRALSGCN GLDESRFLRS HENVDQANPQ SGLFVKVYKS DSFGRTLDMT KFSSYHELRS 720 ELGCLFGLEG QLEDPLRSGW QLVFVDREND VLLVGDDPWQ EFVNNVSCIK ILSPEEVLQM 780 GNQGIDFVNS APVKRLQSNG CDDHVSRQDS TNLSARGSFK Y

Sequence ? help Back to Top

Protein Sequence Length: 821 aa Download sequence

SYTEETRCLN SELWHACAGP LVSLPAVGSR VVYFPQGHSE QVAVSTNKEI DSQIPNYPSL  60
PPQLICQLHN VTMHADVETD EVYAQMTLQP LSPQEQKDPY FPNDLGTSSK QPTNYFCKTL  120
TASDTSTHGG FSVPRRSAEK VFPPLDFSQQ PPVQELVARD LHGNEWKFRH IFRGQPKRHL  180
LTTGWSIFVS AKRLVAGDSV LFIWNENNQL LLGIRHANRP QMFMPSSVLS SDSMHIGLLA  240
AAAHAAATNS RFTIFYNPRA SPSEFVIPLA KYVKAVYHTR VSVGLRFRML FETEESSVRR  300
YMGTITGISD LDPARWPNSH WRSLKVGWDE STAGEKQPRV SLWEIEPLTT FPMYPSSFPL  360
GPKRPWPTGL PFFHGGNDDI SLNSPLMRLR DGGNPAIQSL NFRGIGVTPW MQPRLDALML  420
GLQPDMYQAM TTGVLQEMRT IDPTKQVSPA MLQFQQPQNS ANISTPTLPS PNQSQLLQHH  480
LQWGHSFAQQ GQQHQKIWSG YEEVPYVASN LLQLSSSSQS QSTTLHMISP SSQLKDFPDS  540
NGNSVSASNA SPLHGIFQQI SSEETSQLSL PKYGQPEQLG ATQPNISLYS VMLPPFPGKE  600
CSASRDGNMD TQNQHLFGVN VDSSILVQNG IPSLNTGVTE TCSTNLYATC NLLSSSGNNF  660
AVNRALSGCN GLDESRFLRS HENVDQANPQ SGLFVKVYKS DSFGRTLDMT KFSSYHELRS  720
ELGCLFGLEG QLEDPLRSGW QLVFVDREND VLLVGDDPWQ EFVNNVSCIK ILSPEEVLQM  780
GNQGIDFVNS APVKRLQSNG CDDHVSRQDS TNLSARGSFK Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.1	0.0	ARF family protein