PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW30796.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

RAV

Protein Properties

Length: 357aa MW: 39361.2 Da PI: 9.7732

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW30796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.5	1.4e-12	54	102	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV + +grW A+I++ ++r++lg+f + eAa+a++ a ++++g RWW30796.1 54 SHYKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEAEAARAYDVAVQRFRG 102 79**9888.8*****3.....5******99**********998 PP
2	B3	103.6	1.1e-32	181	277	1	91
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+ tpsdv+k++rlv+pk++ae+h g ++++l +ed +g++W+++++y+++s++yvltkGW++Fvk++gL++gD+++F+ + + e++ RWW30796.1 181 FDKTVTPSDVGKLNRLVIPKQHAERHfplqktGAAAGKGVMLNFEDAHGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLEAGDVITFQSSTDPEKQ 277 89***********************998886677799************************************************66555544 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGTSSEEEAC GEMRKTGLVP SPDPKSLQRV GSGASDVIDP EVGVEAESRK LPSSHYKGVV 60 PQPNGRWGAQ IYEKHQRVWL GTFNEEAEAA RAYDVAVQRF RGRDAITNFK PLDDADNGDA 120 AELSFLGSHS KAEIVDMLRK HTYRDELQKS RLSFCTDSQK TTPRSAPVTG LLAGAQRQHL 180 FDKTVTPSDV GKLNRLVIPK QHAERHFPLQ KTGAAAGKGV MLNFEDAHGK VWRFRYSYWN 240 SSQSYVLTKG WSRFVKEKGL EAGDVITFQS STDPEKQLFI DSTPRAGRGS AAASTQRPPV 300 QVVRLFGFNI VRNPAAPFGG DGVDGNAASC ETGKRNRDHM KSLSSQRMIK RHCTEAL

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGTSSEEEAC GEMRKTGLVP SPDPKSLQRV GSGASDVIDP EVGVEAESRK LPSSHYKGVV  60
PQPNGRWGAQ IYEKHQRVWL GTFNEEAEAA RAYDVAVQRF RGRDAITNFK PLDDADNGDA  120
AELSFLGSHS KAEIVDMLRK HTYRDELQKS RLSFCTDSQK TTPRSAPVTG LLAGAQRQHL  180
FDKTVTPSDV GKLNRLVIPK QHAERHFPLQ KTGAAAGKGV MLNFEDAHGK VWRFRYSYWN  240
SSQSYVLTKG WSRFVKEKGL EAGDVITFQS STDPEKQLFI DSTPRAGRGS AAASTQRPPV  300
QVVRLFGFNI VRNPAAPFGG DGVDGNAASC ETGKRNRDHM KSLSSQRMIK RHCTEAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68840.2	1e-125	RAV family protein