PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW30777.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 409aa MW: 43710.7 Da PI: 6.9513

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW30777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00039	106	125	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +Cp Cgk+F + L H+r RWW30777.1 106 TCPECGKTFASDKALFGHLR 125 6***************9998 PP
2	zf-C2H2	15.9	3.6e-05	267	289	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+Fs++ L Hi +H RWW30777.1 267 YECSVCSKTFSSHQALGGHIASH 289 99******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MGADHLSEVG SCYGIEDVAL GEEAPSGSNG SHTRYKCPET GKAKQETVQE AVPPVPGAEL 60 VADQHGNIKS EICPLDDDHR SVSKASEGFG SSKRKHASKG GSGIPTCPEC GKTFASDKAL 120 FGHLRCHPER DYRGANPPAD ARKQPKPDGG PSSARDLPAE KWQTTARRGR QGTASGGGDG 180 DGEDPLEAAA MTIFRMAHAE HRGRTAITAE EEGTQTKQLQ LTQSDHNDDE LPLRVQNINP 240 GDDLTSSYRR TKKAKVQSAT SDHGRCYECS VCSKTFSSHQ ALGGHIASHN KNKTNPEETA 300 AAATAVENQG VSTAVAKPVT GEHRCKTCND VFTSGQALGG HQRRHFNELH SRSPVPSSSS 360 RPSDNHGAPV QYHHPGEQQL HDPAPSSSSH SAQHAQFRWD LNKAPLDLD

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MGADHLSEVG SCYGIEDVAL GEEAPSGSNG SHTRYKCPET GKAKQETVQE AVPPVPGAEL  60
VADQHGNIKS EICPLDDDHR SVSKASEGFG SSKRKHASKG GSGIPTCPEC GKTFASDKAL  120
FGHLRCHPER DYRGANPPAD ARKQPKPDGG PSSARDLPAE KWQTTARRGR QGTASGGGDG  180
DGEDPLEAAA MTIFRMAHAE HRGRTAITAE EEGTQTKQLQ LTQSDHNDDE LPLRVQNINP  240
GDDLTSSYRR TKKAKVQSAT SDHGRCYECS VCSKTFSSHQ ALGGHIASHN KNKTNPEETA  300
AAATAVENQG VSTAVAKPVT GEHRCKTCND VFTSGQALGG HQRRHFNELH SRSPVPSSSS  360
RPSDNHGAPV QYHHPGEQQL HDPAPSSSSH SAQHAQFRWD LNKAPLDLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17180.1	7e-15	C2H2 family protein