PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW30750.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

CO-like

Protein Properties

Length: 402aa MW: 43828.4 Da PI: 4.7724

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW30750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.1	2.7e-06	29	71	5	41
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+++ ++++ C + + lC++C ++H g H++++ RWW30750.1 29 LCDRCVIQPAIVRCIEENASLCQNCDWNGHGGlaltseHQRQT 71 7*****************************6699999998876 PP
2	CCT	63.9	4.8e-22	345	388	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Re al RYkeK+ktRkF+KkirY+sRKa+A+ R RvKGrFvk+ RWW30750.1 345 RESALIRYKEKKKTRKFDKKIRYASRKARADVRRRVKGRFVKAG 388 99***************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
SDAASLCLSC DRNVHSANAL SRRHLRTLLC DRCVIQPAIV RCIEENASLC QNCDWNGHGG 60 LALTSEHQRQ TINCYSGCPS AAEFSRIWSF FEFPDMEEPD FEKGLMTINE NSVTNCWGPP 120 EDSSTANLGS NGKMNDTKAV DKANPWVGSS SASGLNAMSC SADRPAGSMD STTPKVHQFF 180 LCAYYCPGTD DVDFCKDDFY EGFTMGDVDM TFENYEELFG ASHNQTGDLF DDAGIEGFFD 240 MKENSATNSI CHGESAEEVK QTQATCSNAV SADLAMSNPE GNADSSLALP GRQVHSTLSF 300 SFSGVTGESS AGEDQDCGMS GMLLTGEPPC YHAGPGNSSL PTSIRESALI RYKEKKKTRK 360 FDKKIRYASR KARADVRRRV KGRFVKAGEA YDYDPLSQTR SC

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

SDAASLCLSC DRNVHSANAL SRRHLRTLLC DRCVIQPAIV RCIEENASLC QNCDWNGHGG  60
LALTSEHQRQ TINCYSGCPS AAEFSRIWSF FEFPDMEEPD FEKGLMTINE NSVTNCWGPP  120
EDSSTANLGS NGKMNDTKAV DKANPWVGSS SASGLNAMSC SADRPAGSMD STTPKVHQFF  180
LCAYYCPGTD DVDFCKDDFY EGFTMGDVDM TFENYEELFG ASHNQTGDLF DDAGIEGFFD  240
MKENSATNSI CHGESAEEVK QTQATCSNAV SADLAMSNPE GNADSSLALP GRQVHSTLSF  300
SFSGVTGESS AGEDQDCGMS GMLLTGEPPC YHAGPGNSSL PTSIRESALI RYKEKKKTRK  360
FDKKIRYASR KARADVRRRV KGRFVKAGEA YDYDPLSQTR SC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	6e-76	CO-like family protein