PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW30518.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 228aa    MW: 24803.6 Da    PI: 6.0545
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW30518.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.41.6e-40101091100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 aCaaCk++rr+C++dC+la yfpa+qpk+f+n h+lFG+sn+lk++++l++ ++ +am+s++yeA++r rdPv+G++gvi +l+ q+++l+ el+++ +
  RWW30518.1  10 ACAACKYQRRRCPADCPLAAYFPADQPKQFQNCHRLFGVSNILKIINRLDPPQKAEAMKSIIYEANIRDRDPVHGCLGVICTLHLQIQHLQLELDTATA 108
                 7*********************************************************************************************99887 PP

      DUF260 100 e 100
                 +
  RWW30518.1 109 Q 109
                 6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MTVKGGTNNA CAACKYQRRR CPADCPLAAY FPADQPKQFQ NCHRLFGVSN ILKIINRLDP  60
PQKAEAMKSI IYEANIRDRD PVHGCLGVIC TLHLQIQHLQ LELDTATAQL ALYRHHHHQS  120
LQLASPSSSG SSPITGAAAN CLLFDNGISI VESCSNADNS DINTVGPFWA QNSHANNDST  180
GNSIVAVTAA GLHAPFAGVF DHDYDEIAPY FDTIDEDGAY ESRSIEHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47870.13e-47LBD family protein