PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW30464.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 237aa MW: 26544.1 Da PI: 9.867 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 31.3 | 4.2e-10 | 137 | 157 | 1 | 21 |
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDgy+WrKYGqK+vk++++p RWW30464.1 137 LDDGYKWRKYGQKVVKNTQHP 157 59****************999 PP | |||||||
2 | WRKY | 56.7 | 4.6e-18 | 181 | 219 | 21 | 59 |
-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 rsYYrCt+++C+vkk++er aedp++v++tYeg+H h+ RWW30464.1 181 DRSYYRCTQENCRVKKRIERMAEDPRMVITTYEGRHVHS 219 6*************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MGFNLQASHL PPLSFSPYSL SKTCTVGGED AVSCLRGNLP SLPPDHGDDG SGRLGQSSTQ 60 RSSSDLWSRA GDRAANGKGS SVAAGEHYSN NKNRPAANNI VIDSLSVGAM RMKKVKVRRK 120 VREPRFCFKT MSEVDVLDDG YKWRKYGQKV VKNTQHPSLK LCNRKQQGEV VGPLMMMFAM 180 DRSYYRCTQE NCRVKKRIER MAEDPRMVIT TYEGRHVHSP SHAEEESQPS SEVTLFW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 116 | 122 | KVRRKVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39410.1 | 6e-45 | WRKY family protein |