PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW30437.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 363aa MW: 39873.5 Da PI: 6.9141 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.4 | 2.9e-12 | 82 | 127 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia+++ gR++ + +rw++ RWW30437.1 82 RGHWRPAEDAKLKELVSQYGPQNWNLIAEKLE-GRSGTHPELRWFNQ 127 899*****************************.******99999985 PP | |||||||
2 | Myb_DNA-binding | 57.8 | 2.6e-18 | 134 | 177 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++++G++ W++Iar ++ gRt++ +k++w+ RWW30437.1 134 RSAFSEEEEERLLAAHRLYGNK-WALIARLFP-GRTDNAVKNHWHV 177 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
MASDVPKSIG DMGLFIPPPP PPPPSPGAME CVGGEQAWGF QSFAVGKDYH EGEQNNSQGE 60 EAEGGDDTTT HESGQQNKLC VRGHWRPAED AKLKELVSQY GPQNWNLIAE KLEGRSGTHP 120 ELRWFNQLDP RINRSAFSEE EEERLLAAHR LYGNKWALIA RLFPGRTDNA VKNHWHVIMA 180 RKHREQSNAY RKRKASSTLP SLGPPPAQAI LPRRMEVNTI IHACSGESTI TSTRDESAST 240 CTDLSLTSFT SRAFPNLLYR SCPTQQPTHP CDISNAKDAK VHPARKGCHD KFGDSGHGFF 300 SGLAPMELVP GVDQAAYSCS TTEASAGGTV VYHRSNAWPQ AEPDHGREKI RIPFIDFLGV 360 GAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 8e-66 | MYB family protein |