PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW30332.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C3H

Protein Properties

Length: 687aa MW: 77934.9 Da PI: 4.883

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW30332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	19.5	1.8e-06	78	101	2	26
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 k +C +f+r G+C G+rC++ Hg RWW30332.1 78 KSTPCYYFQR-GQCLKGERCPYVHG 101 7789****.***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence
MESDGGPESI RPATAEEEAV KGNTDCVYFL ASPLTCKKPL DSWFAMPMPT SGPLQPPPTA 60 VSTQIPAAHV PSSNASKKST PCYYFQRGQC LKGERCPYVH GTYAVSSSVS QKVTKASTCL 120 VEPPQIIKKD TQQNITMQQN VAEFSVDKRK MTTDMPVEMP PKAKLVTKAE KPDGDSSENK 180 LFLSYSFDDE LPKLPQNYIA ISSGSSLRKP WSHQVEPSDG QTENNKDTDE FLREYSPGFD 240 VLVEDDIKDP DFFHNEDNFR MASNHGQNLE AEDDYDYHHY NYQSITNFER DQCNGIEKYD 300 NYKQTRGTYS WDPKVSDRIL EKPSSLKRRV LDKETKSDQM DDSDLRHRLL KQRRCHGSRS 360 MDSRDDRGEH YRRDDHCAER AYGHHSRDQA QFPLENSIST RLRGRITFPG RLEKERSRRP 420 RGRQSPTERM NHQKTHPERI RQQPSEDFSE GTSIRHKPIR RDNMNSLDFA SPKSLSELKG 480 VKINGNSNEQ SIRSSSPSTK VNRMKSETVE VLQLSENFLS FEGPKPRSVI LKIKSESAYT 540 DSEISLSQYE NNQGGGESAT TDYMPAAVTI LQSVPPSEAG KEATFMNGNY EVDKLTAIDE 600 EGLILKDDEK TNDAPSSTMA DAVEIGDGMD LENVEDEELE NYDQRDVRLS YEAREFKAEE 660 AENTCQVNDD ELDDEDDFAR KVSVMLS

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence

MESDGGPESI RPATAEEEAV KGNTDCVYFL ASPLTCKKPL DSWFAMPMPT SGPLQPPPTA  60
VSTQIPAAHV PSSNASKKST PCYYFQRGQC LKGERCPYVH GTYAVSSSVS QKVTKASTCL  120
VEPPQIIKKD TQQNITMQQN VAEFSVDKRK MTTDMPVEMP PKAKLVTKAE KPDGDSSENK  180
LFLSYSFDDE LPKLPQNYIA ISSGSSLRKP WSHQVEPSDG QTENNKDTDE FLREYSPGFD  240
VLVEDDIKDP DFFHNEDNFR MASNHGQNLE AEDDYDYHHY NYQSITNFER DQCNGIEKYD  300
NYKQTRGTYS WDPKVSDRIL EKPSSLKRRV LDKETKSDQM DDSDLRHRLL KQRRCHGSRS  360
MDSRDDRGEH YRRDDHCAER AYGHHSRDQA QFPLENSIST RLRGRITFPG RLEKERSRRP  420
RGRQSPTERM NHQKTHPERI RQQPSEDFSE GTSIRHKPIR RDNMNSLDFA SPKSLSELKG  480
VKINGNSNEQ SIRSSSPSTK VNRMKSETVE VLQLSENFLS FEGPKPRSVI LKIKSESAYT  540
DSEISLSQYE NNQGGGESAT TDYMPAAVTI LQSVPPSEAG KEATFMNGNY EVDKLTAIDE  600
EGLILKDDEK TNDAPSSTMA DAVEIGDGMD LENVEDEELE NYDQRDVRLS YEAREFKAEE  660
AENTCQVNDD ELDDEDDFAR KVSVMLS