PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW29949.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 221aa MW: 25513.4 Da PI: 4.9837 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 42.6 | 8.2e-14 | 185 | 214 | 1 | 30 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyy 30 C Cg+++Tp WR+gp g tLCnaCG+++ RWW29949.1 185 CIRCGASQTPKWRKGPTGRMTLCNACGIRF 214 788*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 221 aa Download sequence |
MPPHVSPLSE LDDVFKDIID NDLEDINYKR SYVPDITIEE VALLLNDDDP WHNAPTTKEC 60 DSKEREEQKG EPSSMTPHVS SLSELDDVFK DIINDDLEDV NYKRSYVPDI TIEEVALLLN 120 DDDLRHNALT TKEGDSKEQE EEKGEPYEDS TRRRLPGRRS TKQFFAKRSW SVHPPTRFFK 180 TKKTCIRCGA SQTPKWRKGP TGRMTLCNAC GIRFGCDRLR H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G36240.1 | 7e-12 | GATA family protein |