PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW29627.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 351aa MW: 38682.1 Da PI: 8.8635 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 74 | 119 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v q+G+ +W++Ia+++ gR++k+c++rw++ RWW29627.1 74 RGHWRPVEDARLRQLVSQYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 119 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 56.2 | 8.1e-18 | 126 | 169 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+++l+ a++++G++ W++Iar ++ gRt++ +k++w+ RWW29627.1 126 RRAFSEEEEKRLLAAHRLYGNK-WALIARLFP-GRTDNAVKNHWHV 169 678*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MASNELKATA DMGFFPPPLP PFPGALGSPF GERECKGVEQ GWGFQVSRWG QKEHHGGEVD 60 GGNSSVQHHK LCARGHWRPV EDARLRQLVS QYGPQNWNLI AEKLEGRSGK SCRLRWFNQL 120 DPRINRRAFS EEEEKRLLAA HRLYGNKWAL IARLFPGRTD NAVKNHWHVI MARKQREQSN 180 GYRKRKPPTS SSLSSPPPEV VNSTSHGSCS CDSTIISTKD ESVSTCTTDL SLNSFSTITS 240 MVGPSSLSRH NPPYQTHLHD LANGYGEKGL SAGNQCHQKS DDPGSGFLPN GGAPIRWFPG 300 FDQSGSSANP EISAKETVGY HMSKAWLQGE TTFGRDNISL PFIDFLGVGA T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 2e-69 | MYB family protein |