PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW29520.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 654aa    MW: 72844 Da    PI: 8.9863
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW29520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260103.32.2e-322939100
      DUF260   9 rrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                 rr+C ++Cv+a  fpa+++ +f+ vh++FGasnv++ll++l++e+r++a++slvyeA+ar+rdPv+G+v+ +++lq + ++ + +l+ +k+e
  RWW29520.1   2 RRRCRPECVFASGFPASNMVRFELVHRVFGASNVQRLLAQLRPEQRPEAADSLVYEADARVRDPVHGCVRYMRQLQDEWQKIQRQLHDAKKE 93 
                 99************************************************************************************999887 PP

Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    
MRRRCRPECV FASGFPASNM VRFELVHRVF GASNVQRLLA QLRPEQRPEA ADSLVYEADA  60
RVRDPVHGCV RYMRQLQDEW QKIQRQLHDA KKELSAYLGP VAASPSLPQP YHPHRHLQGS  120
PLCSTTACGI SGMSTDADDR TTRGIIPGTG IGMGLDLGSS GTSGLDASDT STPPEMDIAK  180
GLYLDVPGTS RGIPTTGRRM GLNLDASSSG SPGMCTGTVL HPDAPVTSRH QQSLMHELEQ  240
QQQQQIMNVI AEREQLARSN LGLPDVRIDY KDQIGGGITL AAAAGPPSGL GLPLAQPFEG  300
PSAAQPQQYT EQQQPGLVPV RSLQGSSAAQ QHQQKRQHLS PVQPFQGSFA AQPQRCIQQH  360
HHMGFLPTQS ILGSSPLHPQ HHIQQQRQHL EMVPAQQSQG NYAAWLEQYI EQQHLPFQGA  420
SATQPRHQNE QQSQHHNEQP RQHPRLVPAQ TFQWQSAVQP PHYNRQQNHH RQRKHMDLAS  480
AQSIQWPSVA QPHHHTMQQH HQQWQHNQQR RHLLGLVPAQ PSLGPLAVQP QHRHTQQGQM  540
TLGLVPVPPF DGPFAAQLQQ SIHQHPQYET IQSDDLDYLW SLIDPSRGAT PSGHVFRATR  600
VIILPWPTDY EVVALPSKLR GGRHRTKYVA LLVSGVAVLL HFGPILEFPR LLHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23660.25e-31LBD family protein