PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW29478.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 203aa MW: 23160.3 Da PI: 10.3379 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 36.7 | 8.3e-12 | 50 | 70 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 +Dgy+WrKYGqK vk+s+fpr RWW29478.1 50 EDGYRWRKYGQKAVKNSPFPR 70 8*******************9 PP | |||||||
2 | WRKY | 51.5 | 2e-16 | 96 | 135 | 20 | 59 |
S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 rsYYrCt ++C+vkk+vers++dp++v++tYeg+H h+ RWW29478.1 96 SCRSYYRCTNSKCTVKKRVERSSHDPTIVITTYEGQHCHH 135 68***********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MGIERSRPRG GNSVCWTQIG CRNTSAKRGQ KRTRQPRFAF MTKSENEQLE DGYRWRKYGQ 60 KAVKNSPFPR LCIPDFSKQG WKASELRLMT ASRRHSCRSY YRCTNSKCTV KKRVERSSHD 120 PTIVITTYEG QHCHHTICFP RGSTRPTLSS PQRHLHLPMH PGQLMSDPPC EDPITPFLAE 180 TTSSAPTDEG LLDDIVPSGI RRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 6e-43 | WRKY family protein |