PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW29458.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GATA
Protein Properties Length: 278aa    MW: 30574.8 Da    PI: 9.0508
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW29458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.23.1e-15144186134
        GATA   1 CsnCgttkTplWRrgpdgnkt.........LCnaCGlyyrkkg 34 
                 Cs C+ttkTplWR+gp+g+k          LCnaCG+++rk +
  RWW29458.1 144 CSDCNTTKTPLWRSGPRGPKLraplsvvqsLCNACGIRQRKAR 186
                 *******************98888889999**********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MSPLDLNQVC VIHIEEGGHL PPSALANPSS SFSCPDLFRV RHDERGGYCI GHHLHQPQQE  60
PEEEFQIARS SDEYMTQHPA DPSDDIREEP AGPGRWMSPK MCFVRKTMNS THIVVSKPRG  120
NRPVSEFGTY NQSSSSPGGI IRVCSDCNTT KTPLWRSGPR GPKLRAPLSV VQSLCNACGI  180
RQRKARRAMA AAALNGGLIP ADAPSQVQKE RELDVHRNLP FKKRCKVDTA GSITATKLRF  240
GEATLNLNRS SAIKKVFPQE DRDAAILLMA LSCGLIRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183226RKARRAMAAAALNGGLIPADAPSQVQKERELDVHRNLPFKKRCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.15e-21GATA family protein