PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW29329.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 312aa MW: 34777 Da PI: 6.6087 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.1 | 6.5e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed +l+ ++kq+G+g +W + ++++g++R++k+c++rw++yl RWW29329.1 14 KGQWSPDEDAKLKSYIKQHGTGgSWIALPQKIGLKRCGKSCRLRWLNYL 62 799********************************************97 PP | |||||||
2 | Myb_DNA-binding | 34.8 | 3.8e-11 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd+++ + G++ W+ a+ ++ gRt++++k++w++ RWW29329.1 69 GGFSQEEDDIICSLYVSIGSR-WSMMASQLP-GRTDNDIKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MGRTPCCDKA TVKKGQWSPD EDAKLKSYIK QHGTGGSWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIRHGG FSQEEDDIIC SLYVSIGSRW SMMASQLPGR TDNDIKNYWN TRLKKKLFGK 120 QPKEPPHSRL RTSACHQKQE AKGDDNGDWR QQPALVYPTD HCMGASYGGH LVVPSSTLQE 180 AKGDDNGDWR QQPALVYPTD HCMGTSYGSS TLPRQQICDD YDGDLNGLAW SSLLGTPGGQ 240 ALQDPNGFST ELDEVLGLNQ VNLEESNATA ESEKMNWNEV SPLLFSGPVI KGCEGMQQYL 300 LQEQMACNYD LI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65790.1 | 3e-76 | MYB family protein |