PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW29092.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 465aa MW: 51532.1 Da PI: 5.2807

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW29092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.9e-16	48	95	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lv++vk++G g+W+++ + + R++k+c++rw ++l RWW29092.1 48 KGPWTSAEDAILVEYVKEHGEGNWNAVQKNSELSRCGKSCRLRWANHL 95 79******************************************9986 PP
2	Myb_DNA-binding	50.1	6.5e-16	101	144	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++l++++++++G++ W+ a ++ gRt++++k++w++ RWW29092.1 101 KGAFTPEEEQLIIKLHAKMGNK-WAQMATQLP-GRTDNEIKNFWNT 144 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MGSRSWEMNH LSSKSDMEMI PQDHMNTPSV DEGRRRKSVS KDGQYLKKGP WTSAEDAILV 60 EYVKEHGEGN WNAVQKNSEL SRCGKSCRLR WANHLRPNLK KGAFTPEEEQ LIIKLHAKMG 120 NKWAQMATQL PGRTDNEIKN FWNTRIKRLQ RAGLPLYPPN VCFQASDGDQ QTQIVSPVTQ 180 HQTDILRGNN FDFPDIIFEN FYQDHGDLSY TSSVPDISMS SMCQGFESQD HGYTNMLNNV 240 EQLRDSETIN VGYGSTFYSG LPSVSRLPFE ASGKIQLAFG LDYPYDPDAN IKNLTTFGGE 300 ISLSHAFSNG NSSASRPLSG AAKLELPSLQ HVETGDSSWT AYHSTPHLEA VDTYLESSPT 360 AVSLQSECIS PRSSGLLDVM LHEAQALSNS KRHSYEKSSS SSAITHNEMV ESSGLNLFDI 420 GWEDCNDPIS PLGCSAASIF NEFVPPINGS SIHEFLPSDS TTGPF

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MGSRSWEMNH LSSKSDMEMI PQDHMNTPSV DEGRRRKSVS KDGQYLKKGP WTSAEDAILV  60
EYVKEHGEGN WNAVQKNSEL SRCGKSCRLR WANHLRPNLK KGAFTPEEEQ LIIKLHAKMG  120
NKWAQMATQL PGRTDNEIKN FWNTRIKRLQ RAGLPLYPPN VCFQASDGDQ QTQIVSPVTQ  180
HQTDILRGNN FDFPDIIFEN FYQDHGDLSY TSSVPDISMS SMCQGFESQD HGYTNMLNNV  240
EQLRDSETIN VGYGSTFYSG LPSVSRLPFE ASGKIQLAFG LDYPYDPDAN IKNLTTFGGE  300
ISLSHAFSNG NSSASRPLSG AAKLELPSLQ HVETGDSSWT AYHSTPHLEA VDTYLESSPT  360
AVSLQSECIS PRSSGLLDVM LHEAQALSNS KRHSYEKSSS SSAITHNEMV ESSGLNLFDI  420
GWEDCNDPIS PLGCSAASIF NEFVPPINGS SIHEFLPSDS TTGPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	4e-88	MYB family protein