PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW28417.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 240aa MW: 25195.4 Da PI: 4.2892 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 47.4 | 3.7e-15 | 53 | 93 | 20 | 59 |
S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrC+s+ gCp++k+ver++ dp+v+++tY +Hnh+ RWW28417.1 53 KRRGYYRCSSSkGCPARKQVERNRVDPTVIVVTYAFDHNHT 93 3499*****998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MNGSCSNELD ACEIEEVEIA SEINDARPAS PGSGDDSKPV HSLGASTSSP YPKRRGYYRC 60 SSSKGCPARK QVERNRVDPT VIVVTYAFDH NHTSPLPKNH HHKHAAVAAQ PVEEQPLTPQ 120 LNQSGTPDSA EPDEKFSDLI TEEESAFTVH AGGGFPWFAD VCSAHPTSPS AADSDELLYG 180 SVLFAGATTG AALPEELEEA AGGGDGGDDD SLFAGLGELP EYTVVLRWGL ASASWVGTAG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.1 | 1e-18 | WRKY family protein |