PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW28408.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 553aa MW: 60669.9 Da PI: 8.6942

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW28408.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	31.1	5.1e-10	168	192	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r++W+++LH+rFv a+eqLGG++ RWW28408.1 168 KERRCWSQDLHRRFVLAIEQLGGTQ 192 68*********************87 PP
2	DUF260	136.2	1.2e-42	293	392	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC++ Cv+apyfp +qp kfa vh++FGasnv kll++l++++reda++sl+yeAear++dPvyG+vg i+ lq+ql+q++ +l +k+ RWW28408.1 293 PCAACKLLRRKCTPACVFAPYFPPDQPTKFASVHRVFGASNVAKLLNELSPSQREDAVNSLAYEAEARLHDPVYGCVGYIWLLQHQLNQVQRDLYDAKK 391 7*******************************************************************************************9998887 PP DUF260 100 e 100 e RWW28408.1 392 E 392 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MGSAVAEMGL ELELCAMRTV GSFVKEASAI ESGDGGRATR LEASIKSLEE EKRKIDAFRR 60 ELPLCMRLLS EGPREEQSNL ECKNRRSGAA LLLFKGLPPL AASSMTEDKP TASLPELSLQ 120 SAVIKSNPDV VTPVTVDHRG GSAKGARKSP ELFRATLSVQ SQQQPPRKER RCWSQDLHRR 180 FVLAIEQLGG TQVPLLWVRE EQQYTSSSQQ SISQAGSPMS PLQLAGSTRA LSVIAADSSE 240 EDGRSESYSW SFPAITVRQQ GTDEACASLI RNLILLFLGR SKRRSMSPST SSPCAACKLL 300 RRKCTPACVF APYFPPDQPT KFASVHRVFG ASNVAKLLNE LSPSQREDAV NSLAYEAEAR 360 LHDPVYGCVG YIWLLQHQLN QVQRDLYDAK KELSTYLSTP IADPQKPAHR LLHYRQRLQG 420 ASPSAAPPTV TVMTLGLATP EASSHQQILM HELQQQMAAV QQIAATAVAS TREQEMVRSY 480 EQQQKELARF RPVSMEGGGR GYCPTAFDGL SCVQQQHTPK QQVLQMGRSS GHDHERSGGL 540 APDTCRLSFP GKS

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MGSAVAEMGL ELELCAMRTV GSFVKEASAI ESGDGGRATR LEASIKSLEE EKRKIDAFRR  60
ELPLCMRLLS EGPREEQSNL ECKNRRSGAA LLLFKGLPPL AASSMTEDKP TASLPELSLQ  120
SAVIKSNPDV VTPVTVDHRG GSAKGARKSP ELFRATLSVQ SQQQPPRKER RCWSQDLHRR  180
FVLAIEQLGG TQVPLLWVRE EQQYTSSSQQ SISQAGSPMS PLQLAGSTRA LSVIAADSSE  240
EDGRSESYSW SFPAITVRQQ GTDEACASLI RNLILLFLGR SKRRSMSPST SSPCAACKLL  300
RRKCTPACVF APYFPPDQPT KFASVHRVFG ASNVAKLLNE LSPSQREDAV NSLAYEAEAR  360
LHDPVYGCVG YIWLLQHQLN QVQRDLYDAK KELSTYLSTP IADPQKPAHR LLHYRQRLQG  420
ASPSAAPPTV TVMTLGLATP EASSHQQILM HELQQQMAAV QQIAATAVAS TREQEMVRSY  480
EQQQKELARF RPVSMEGGGR GYCPTAFDGL SCVQQQHTPK QQVLQMGRSS GHDHERSGGL  540
APDTCRLSFP GKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	1e-53	LBD family protein