PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW28258.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 318aa MW: 35135.4 Da PI: 6.6746 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 64.3 | 2.4e-20 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+d+v+++G g+W++I++ g+ R++k+c++rw +yl RWW28258.1 15 KGPWTPEEDRKLIDYVQKHGRGSWHRIPKLAGLSRCGKSCRLRWTNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.2 | 1.6e-17 | 68 | 117 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l+v+++ +lG++ W++Ia +++ gRt++++k++w+++l RWW28258.1 68 RGKFTEEEEQLIVHLHSLLGNKyelPWSSIATKLP-GRTDNEIKNYWNTHL 117 89*********************************.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
MARSPSHEEM GSVKKGPWTP EEDRKLIDYV QKHGRGSWHR IPKLAGLSRC GKSCRLRWTN 60 YLRPDIKRGK FTEEEEQLIV HLHSLLGNKY ELPWSSIATK LPGRTDNEIK NYWNTHLRKK 120 LMRMGIDPVT HRPTTDLSLL TSISSLLSAG SLGYTTSHLE TALKLQAEAA HLVQSLIQAL 180 TSSSTSNTDL MNVFGSPSHT NYKASDGCLG GSFNLQNSAS VIPYLNKDSQ PVPDFSFCID 240 EGGVTASRTE EGQSTSSLLP SKSTPPFVST SSEADNVDLL MSSESTYANS LSFTPFEGWE 300 NLNLDSLIND LGCKEIPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 9e-74 | MYB family protein |