PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW27170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 104aa MW: 11573.2 Da PI: 4.5815 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 46.5 | 1.1e-14 | 3 | 60 | 43 | 100 |
DUF260 43 lkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +++l+++p e+r++a+++++ eA +r++dPvyG+vgvi+ lq++++ ++ ela+++++ RWW27170.1 3 INILQQIPVEQRRHAADAIALEAYWRVQDPVYGSVGVISLLQKEISLAQRELAETQAQ 60 689**************************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence |
MCINILQQIP VEQRRHAADA IALEAYWRVQ DPVYGSVGVI SLLQKEISLA QRELAETQAQ 60 VAMYTAQVQS QSNQITQVQY LVDNAHLIPN QPPIPGLCQP PDIP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 1e-15 | LBD family protein |