PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW27169.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 213aa MW: 23751 Da PI: 10.1795 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 108.5 | 3.2e-34 | 44 | 101 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt+a+C vkk+vers++dp vv++tYeg+H+h+ RWW27169.1 44 EDGYRWRKYGQKAVKNSPFPRSYYRCTTATCGVKKRVERSSDDPAVVVTTYEGQHTHP 101 8********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MFGKHYKSGR SCKEGGGKKK KKGQKPQKEP RFAFKTRSEV DHLEDGYRWR KYGQKAVKNS 60 PFPRSYYRCT TATCGVKKRV ERSSDDPAVV VTTYEGQHTH PSPIVPCGAH HAPPRPPPLL 120 PAEPSMPSPH GFGLSSPVNT KEFQLPLLSS YLEPPPLDFH RSAAPRNLVV TSDLTASIEG 180 RNQSSEAAIR DYGLLQDLIP SKIRKEDVGW IFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49520.1 | 4e-43 | WRKY family protein |