PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW27118.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ARF

Protein Properties

Length: 387aa MW: 43455.6 Da PI: 7.6464

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW27118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	67.7	1.6e-21	112	212	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+k+lt sd++++g +++ +++a e+ ++++ s++l+ + ++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +++ + ++ el+v RWW27118.1 112 FCKILTASDTSTHGGFSVLRRHAIEClppldVSQQTPSQELVAKGLHGLEWRFKHIFRGQPRRHLLTTGWSTFVASKKLVAGDAFILL--RGENDELRV 208 99***************************445556779*******************************************9..3488889 PP EEE- CS B3 95 kvfr 98 +v+r RWW27118.1 209 GVRR 212 **98 PP
2	Auxin_resp	99.6	4.2e-33	238	319	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st++ F v+Y+Pr+ F+v+++k+++a+k++++vGmRfkm+fe+ed+++++++Gtv+g+ d+++ +Wp+SkWrsLk RWW27118.1 238 ASHAISTHTLFMVYYKPRSELILFIVSLNKYLEATKNEFAVGMRFKMKFEGEDVPKKSFTGTVIGIGDISS-QWPGSKWRSLK 319 789***************************************************************777.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
GDAGDRLYEE LWRACAGPLV EIPRVDERVF YFPQGHLEQL EVSTDQDLNQ QIPQFNLPSK 60 ILCRVVNVTL KAEPDTDQVY AQITLIPESN QNEPTSPDPC VLEMPRPVVH SFCKILTASD 120 TSTHGGFSVL RRHAIECLPP LDVSQQTPSQ ELVAKGLHGL EWRFKHIFRG QPRRHLLTTG 180 WSTFVASKKL VAGDAFILLR GENDELRVGV RRPARYQNTL PTSVISSHSM HVGVLATASH 240 AISTHTLFMV YYKPRSELIL FIVSLNKYLE ATKNEFAVGM RFKMKFEGED VPKKSFTGTV 300 IGIGDISSQW PGSKWRSLKV HWDEASSIQK PEKISPWDVE PFSQPISASG DPQAAFSKKR 360 ARSRLDLPGN GSENEVIPFH IICSIFM

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

GDAGDRLYEE LWRACAGPLV EIPRVDERVF YFPQGHLEQL EVSTDQDLNQ QIPQFNLPSK  60
ILCRVVNVTL KAEPDTDQVY AQITLIPESN QNEPTSPDPC VLEMPRPVVH SFCKILTASD  120
TSTHGGFSVL RRHAIECLPP LDVSQQTPSQ ELVAKGLHGL EWRFKHIFRG QPRRHLLTTG  180
WSTFVASKKL VAGDAFILLR GENDELRVGV RRPARYQNTL PTSVISSHSM HVGVLATASH  240
AISTHTLFMV YYKPRSELIL FIVSLNKYLE ATKNEFAVGM RFKMKFEGED VPKKSFTGTV  300
IGIGDISSQW PGSKWRSLKV HWDEASSIQK PEKISPWDVE PFSQPISASG DPQAAFSKKR  360
ARSRLDLPGN GSENEVIPFH IICSIFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46530.1	0.0	ARF family protein