PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW26946.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 403aa MW: 41842.4 Da PI: 4.6238

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW26946.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.8	6.9e-07	365	389	7	30
HHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 7 erErrRRdriNsafeeLrellPk.a 30 ++ErrRR+++N+++ Lr+++Pk + RWW26946.1 365 MAERRRRKKLNDRLYMLRSVVPKiS 389 79********************955 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MLSRINGVVW SEEGGDEEDA ASWTRASAPG ASGGAMGESK DELGLPSFKS MLDDDWYLGG 60 VAAASNALPS AGVQHPFDAF QTHQDVAFAS SAKPHEALLL PPVDELGQNQ PFFPAKSALS 120 SLFGAVCSNP FDAGLDLGCD APAFLAAPHV SHSTVLMNRS GGSGDGVLDF GGMGADDQLG 180 CADLSPGADF SGGRLLPPSD TCSGSISGAT FGPMGFDSFE NSPFLNRSKV LRPLEIFPPV 240 GALPTLFQKR AAAALRQNSG VAGEKGGFLG LWGSEGVGHG NRGKSALEEE NEKKRQGNED 300 DEIDDGSMDA SGLNYDTDDA AGESAQGEEN AKDGGGGSNS MANSTVTGGG DQKGKKKGLP 360 AKNLMAERRR RKKLNDRLYM LRSVVPKISK VKNLAPFSSW LLA

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MLSRINGVVW SEEGGDEEDA ASWTRASAPG ASGGAMGESK DELGLPSFKS MLDDDWYLGG  60
VAAASNALPS AGVQHPFDAF QTHQDVAFAS SAKPHEALLL PPVDELGQNQ PFFPAKSALS  120
SLFGAVCSNP FDAGLDLGCD APAFLAAPHV SHSTVLMNRS GGSGDGVLDF GGMGADDQLG  180
CADLSPGADF SGGRLLPPSD TCSGSISGAT FGPMGFDSFE NSPFLNRSKV LRPLEIFPPV  240
GALPTLFQKR AAAALRQNSG VAGEKGGFLG LWGSEGVGHG NRGKSALEEE NEKKRQGNED  300
DEIDDGSMDA SGLNYDTDDA AGESAQGEEN AKDGGGGSNS MANSTVTGGG DQKGKKKGLP  360
AKNLMAERRR RKKLNDRLYM LRSVVPKISK VKNLAPFSSW LLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	355	373	KKKGLPAKNLMAERRRRKK
2	367	374	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-30	bHLH family protein