PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW26934.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 997aa MW: 108276 Da PI: 6.1128

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW26934.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.9	4e-07	76	117	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +W+++E + + +++G++ +++I+ ++ ++t +c+++++k RWW26934.1 76 PWSQDEKVVFMEMLAKYGKD-FTRISLSLN-HKTTADCIEFYYK 117 8***************99.*****.*********98 PP
2	Myb_DNA-binding	29.3	2.1e-09	283	321	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT +E l+v+a ++G++ +++I+++m R+++qck ++ RWW26934.1 283 WTDDEKSLFVQALSMYGKD-FTRISSCMR--RSREQCKIFFS 321 ***************99.****8..*****8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 997 aa Download sequence
MMYLSKRNLT LVPTTEIVDF TGKLLSDSLI KLYRNNLKMP ALILDDKEKA YSRFDTQNGL 60 IEDPLIFEKE RALINPWSQD EKVVFMEMLA KYGKDFTRIS LSLNHKTTAD CIEFYYKNHK 120 SESFKEVKKC LDLRKQQQCL RANTYLVASG NKWNHEISSA SSHRLASAPI AVAHGHGTAR 180 NEKNIGSVVY GAYNDVKVPY LEGANSVNIS GEERESVAAD VLAGIRGALF SEAMSSCDTS 240 SIDPSEKMNC TTAERLLTPE ITQNLDEDDC SDEGCGELDS ADWTDDEKSL FVQALSMYGK 300 DFTRISSCMR RSREQCKIFF SKARKCLGLD VILQGTVNVG MPLSDTNGGR SDTDDACVAE 360 MNSAICSTQS CSKMGVDASQ SVANISYEGI AHVASTHFHV ETDRSNKKDE DVLTGPDLDG 420 GGEKVGTRHV STVHDDKLVG EADNLASDAC PKESIVDALG GTTAAQLCKV TDSADTETKV 480 GRIANIVSPT KSLVTIRKTD PLTIACMDVQ SKQLTASIVD KAGTDGSYPA DGLKEVDSKA 540 SPTTEDGLSS KKSINNNFTA IGNGSLNTVP DSNAGGAPLL SGNKVNVRHR LTFGPNYQQQ 600 MHLDLLPCVP KKHHTVLLKQ EDVHSIPLNS FLPDPSSICF GGPVDVSSET TLNFEEHGSK 660 WHQNMVKREI YQQYITRNLP VNQVDHNVHI LRGYPLQALN QEVKRETDLP AGEKRSLPET 720 ESKRCGVSQS NQFFMSDMHW NKSDPSHSRS SISCPSRTEN HSEAELRTCV KNACSEIEEH 780 RTGDVKLFGK ILSHTCPLQK SCTSSHESNV PSSPKLDDCS TANSACMVKD GNRLVSDAGN 840 GQAGLEDPPA RTCGFWDGKR VQNGNSSLPD TTAMLAKYQG SLTGVSFYST KDAIPSQNGG 900 VVTDYPQSCM QQLSSDGKRI ENIPELQKRN AIGIVSGFQQ QGRVTPLGGN MMGGGGILVG 960 GGGGVSDPVA ALKMHYATRA SVGSTDMESW RGDMGGR

Sequence ? help Back to Top

Protein Sequence Length: 997 aa Download sequence

MMYLSKRNLT LVPTTEIVDF TGKLLSDSLI KLYRNNLKMP ALILDDKEKA YSRFDTQNGL  60
IEDPLIFEKE RALINPWSQD EKVVFMEMLA KYGKDFTRIS LSLNHKTTAD CIEFYYKNHK  120
SESFKEVKKC LDLRKQQQCL RANTYLVASG NKWNHEISSA SSHRLASAPI AVAHGHGTAR  180
NEKNIGSVVY GAYNDVKVPY LEGANSVNIS GEERESVAAD VLAGIRGALF SEAMSSCDTS  240
SIDPSEKMNC TTAERLLTPE ITQNLDEDDC SDEGCGELDS ADWTDDEKSL FVQALSMYGK  300
DFTRISSCMR RSREQCKIFF SKARKCLGLD VILQGTVNVG MPLSDTNGGR SDTDDACVAE  360
MNSAICSTQS CSKMGVDASQ SVANISYEGI AHVASTHFHV ETDRSNKKDE DVLTGPDLDG  420
GGEKVGTRHV STVHDDKLVG EADNLASDAC PKESIVDALG GTTAAQLCKV TDSADTETKV  480
GRIANIVSPT KSLVTIRKTD PLTIACMDVQ SKQLTASIVD KAGTDGSYPA DGLKEVDSKA  540
SPTTEDGLSS KKSINNNFTA IGNGSLNTVP DSNAGGAPLL SGNKVNVRHR LTFGPNYQQQ  600
MHLDLLPCVP KKHHTVLLKQ EDVHSIPLNS FLPDPSSICF GGPVDVSSET TLNFEEHGSK  660
WHQNMVKREI YQQYITRNLP VNQVDHNVHI LRGYPLQALN QEVKRETDLP AGEKRSLPET  720
ESKRCGVSQS NQFFMSDMHW NKSDPSHSRS SISCPSRTEN HSEAELRTCV KNACSEIEEH  780
RTGDVKLFGK ILSHTCPLQK SCTSSHESNV PSSPKLDDCS TANSACMVKD GNRLVSDAGN  840
GQAGLEDPPA RTCGFWDGKR VQNGNSSLPD TTAMLAKYQG SLTGVSFYST KDAIPSQNGG  900
VVTDYPQSCM QQLSSDGKRI ENIPELQKRN AIGIVSGFQQ QGRVTPLGGN MMGGGGILVG  960
GGGGVSDPVA ALKMHYATRA SVGSTDMESW RGDMGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	3e-71	MYB family protein