PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW26926.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 494aa MW: 54649.9 Da PI: 11.3867

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW26926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.7	7.1e-17	169	255	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y++Y+++vGF v k+++k+ ++g+ t+ C + gk++ +++k + +++ + +++C+akl+ + +dg+ +vt++ leHnHel+p RWW26926.1 169 EYYKTYGNQVGFPVFKKSTKND-KQGRLHFVTLSCGRGGKSRCKREK---SVNPSLTMKIECNAKLNARVYDDGVVRVTSVFLEHNHELSP 255 69***********9987666.7788**********998776...999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MTCGIKVRRV KAEVATLVPT HDTSRLPSRN LPSGPFGVVV LRRRRLLTLF SFPSLAALFV 60 SPTSSYRCLL AASLRRSPLR RIPSTSLAII DGWLPSSISP DLLTASAAST EHMEEETEQS 120 RATQENTTVA IVVIQDGNKC DLDASPKGKD VVEPPSAGMM FKCIDELYEY YKTYGNQVGF 180 PVFKKSTKND KQGRLHFVTL SCGRGGKSRC KREKSVNPSL TMKIECNAKL NARVYDDGVV 240 RVTSVFLEHN HELSPTRARY LPRRRSVSTS IKRRREKIDQ ADVTIRLSLY PAPAAVAPTR 300 SPDPSRPRQT SRKARRLRRC RCRHGRAGPG GVVLAGGRHC RGGRDDQERP GVAGAGVQGG 360 NPVPALAPDP AGDALVGAAP LVRRSSPPFL LLPLRRLQAA RRRSLHRRLA EPYRPRVRAT 420 REAHGYARPV IDRIDVDNKL THRLYRPATV STYPPASVDF CVPIPPLDTR LRTPNPSAGP 480 TRLHLRLRFD GFSV

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MTCGIKVRRV KAEVATLVPT HDTSRLPSRN LPSGPFGVVV LRRRRLLTLF SFPSLAALFV  60
SPTSSYRCLL AASLRRSPLR RIPSTSLAII DGWLPSSISP DLLTASAAST EHMEEETEQS  120
RATQENTTVA IVVIQDGNKC DLDASPKGKD VVEPPSAGMM FKCIDELYEY YKTYGNQVGF  180
PVFKKSTKND KQGRLHFVTL SCGRGGKSRC KREKSVNPSL TMKIECNAKL NARVYDDGVV  240
RVTSVFLEHN HELSPTRARY LPRRRSVSTS IKRRREKIDQ ADVTIRLSLY PAPAAVAPTR  300
SPDPSRPRQT SRKARRLRRC RCRHGRAGPG GVVLAGGRHC RGGRDDQERP GVAGAGVQGG  360
NPVPALAPDP AGDALVGAAP LVRRSSPPFL LLPLRRLQAA RRRSLHRRLA EPYRPRVRAT  420
REAHGYARPV IDRIDVDNKL THRLYRPATV STYPPASVDF CVPIPPLDTR LRTPNPSAGP  480
TRLHLRLRFD GFSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	5e-10	FAR1 family protein