PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW26781.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 135aa MW: 13974.7 Da PI: 4.969 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 58.7 | 1.6e-18 | 7 | 68 | 40 | 101 |
DUF260 40 snvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 + +l+ +++pe++r da++slvyeA++r+rdPvyG++gvi++lqqq++ l+aela++k+++ RWW26781.1 7 ACLLQSNQEVPESQRADAANSLVYEANIRLRDPVYGSLGVISTLQQQVQALEAELAAVKAQI 68 557788899*************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MSLNGDACLL QSNQEVPESQ RADAANSLVY EANIRLRDPV YGSLGVISTL QQQVQALEAE 60 LAAVKAQILK CKYRQTAAAA ILPTPHAAAF LISNGVISGA APRAPASSSS SMFAAAASSS 120 TDYSSITNDN VSLFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40470.1 | 3e-16 | LBD family protein |