PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW26415.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 111aa MW: 11999.8 Da PI: 11.0391 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.2 | 7.7e-18 | 26 | 73 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l + v+++G g+W+++ r+ g+ R++k+c++rw ++l RWW26415.1 26 KGPWTPAEDAILMEHVRRHGEGNWNSVQRHSGLARCGKSCRLRWANHL 73 79******************************************9996 PP | |||||||
2 | Myb_DNA-binding | 26.2 | 1.8e-08 | 79 | 108 | 1 | 31 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartm 31 +g++++eE++l+++++ qlG++ W++ a+++ RWW26415.1 79 KGSFSPEEELLILRLHSQLGNK-WARMAAHV 108 799*******************.*****996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence |
MKGGEGVGGG KKAVGGAGGG EGGLKKGPWT PAEDAILMEH VRRHGEGNWN SVQRHSGLAR 60 CGKSCRLRWA NHLRPNLKKG SFSPEEELLI LRLHSQLGNK WARMAAHVLL F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32460.1 | 1e-43 | MYB family protein |