PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW26265.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 296aa MW: 31253.1 Da PI: 8.4826 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 89 | 3.9e-28 | 100 | 159 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEE.EEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkk.versaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+ v+r+a+d +v+++ Yeg+Hnh+ RWW26265.1 100 SDGCHWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQvVQRCAKDRSVLITNYEGTHNHP 159 7***************************99******9459*******************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MLYLIFHQIT SEVDESQEEG DEGGAVVPLQ FIDLKPASVV DEESHSIKDE GTQRRRSSSP 60 ADLPPSKSSE QEHEASTRKA RVSVRARSSA PMVELPVYIS DGCHWRKYGQ KMAKGNPCPR 120 AYYRCTMAAG CPVRKQVVQR CAKDRSVLIT NYEGTHNHPL PPAAMAMAST ISAAAAMLLS 180 GSTTSSEGVT NPSNPLARAI MPSSSGVVTI SASAPFPTVT LDLTRTSSPL PASSSSRVFG 240 QPPHNQSKPQ SVADTVSVAT AAMVADPNFS AALAAAISSI MGRKGDGGTH QTSNSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 6e-57 | WRKY family protein |