PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW26254.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | bHLH | ||||||||
Protein Properties | Length: 242aa MW: 25985.4 Da PI: 7.5075 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.2 | 6.9e-09 | 150 | 190 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A++Y+k L RWW26254.1 150 ARHRRERISERIRILQQLVPGG-----TKMDTASMLDEAIHYMKFL 190 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MDVGYLSSAT EAQMDLTTMV REMENFGGLS EAPVRPSESY SGGPSPEFCS AGATTTTTTT 60 SLLVGGAPPS SAFGGPQDLL TPAFSNSPAA AELVLRGASQ GCGRRLSVAA MREMIFRIAA 120 MQPIHIDPET VRPPKRRNVK ISKDPQSVAA RHRRERISER IRILQQLVPG GTKMDTASML 180 DEAIHYMKFL KSQLQSLQRT AAVPHRAADF SMHGTGSSDG SCSCFIKGDD EAPEQGFTMN 240 TF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 137 | RPPKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50330.1 | 7e-46 | bHLH family protein |