PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW25805.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 156aa    MW: 17406.9 Da    PI: 6.7419
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW25805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260141.23.3e-4461051100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +Ca+Ck+lrr+C+kdC++apyfp+++p+kf +vhk+FGasnv+k+l++lp ++r da+sslvyeA ar++dPvyG+vg i+ lq+q++ql+ +l ++++
  RWW25805.1   6 PCASCKLLRRRCTKDCIFAPYFPSDDPHKFSIVHKIFGASNVSKMLQELPVHQRADAVSSLVYEATARTKDPVYGCVGAISYLQNQVSQLQMQLTVAQT 104
                 7*********************************************************************************************99998 PP

      DUF260 100 e 100
                 e
  RWW25805.1 105 E 105
                 7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEGNSPCASC KLLRRRCTKD CIFAPYFPSD DPHKFSIVHK IFGASNVSKM LQELPVHQRA  60
DAVSSLVYEA TARTKDPVYG CVGAISYLQN QVSQLQMQLT VAQTEILCAQ MQQVPAMAEQ  120
QIEAYDNNLT GMPQLMNNAS SSSLAQDQLK REFLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.14e-73LBD family protein