PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW25805.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 156aa MW: 17406.9 Da PI: 6.7419 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 141.2 | 3.3e-44 | 6 | 105 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrr+C+kdC++apyfp+++p+kf +vhk+FGasnv+k+l++lp ++r da+sslvyeA ar++dPvyG+vg i+ lq+q++ql+ +l ++++ RWW25805.1 6 PCASCKLLRRRCTKDCIFAPYFPSDDPHKFSIVHKIFGASNVSKMLQELPVHQRADAVSSLVYEATARTKDPVYGCVGAISYLQNQVSQLQMQLTVAQT 104 7*********************************************************************************************99998 PP DUF260 100 e 100 e RWW25805.1 105 E 105 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MEGNSPCASC KLLRRRCTKD CIFAPYFPSD DPHKFSIVHK IFGASNVSKM LQELPVHQRA 60 DAVSSLVYEA TARTKDPVYG CVGAISYLQN QVSQLQMQLT VAQTEILCAQ MQQVPAMAEQ 120 QIEAYDNNLT GMPQLMNNAS SSSLAQDQLK REFLWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30130.1 | 4e-73 | LBD family protein |