PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW25784.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 316aa MW: 35660.2 Da PI: 7.0491

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW25784.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	84.8	1.1e-26	95	176	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rre++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk k+++k+ +++y+++l+ RWW25784.1 95 WAQEETRSLIAFRREIDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQSKGS-GLG--KMSYYKELD 176 ******************************************************************9984.333..589999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MSLLTLDQFL ARSPCLGSSA VGGNIGEGGA VVAVTEQATK SMYLAEKPRG VDFYDTGGLP 60 PQQQQQQHPQ QQMLMAESSG DDHEVKAPKK RAETWAQEET RSLIAFRREI DGLFNTSKSN 120 KHLWEQISAK MREKGFDRSP TMCTDKWRNL LKEFKKAKHQ SKGSGLGKMS YYKELDELLK 180 ERNKKASFKS SVAPKIDTYL QFSDKGDTKF YLQILENLLG YECLEDANTP FGSVEADNNA 240 SYGGRVILVK WEDYSRRIGI DGTAEAIKEA IKSAFGLRTK RAFWLEDEDN VVRSLDRDMP 300 LGSYTLHLDE GNDKYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.2	1e-112	Trihelix family protein