PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW25132.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 426aa MW: 47369.4 Da PI: 5.0904

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW25132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64.7	2.1e-20	31	111	25	86
trihelix 25 k..................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk++++ +k+ +++++++ +++d ++ RWW25132.1 31 TvakgkksatasvpvsallQKKGKWKSVSQAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDLLGKGtACRVVENQALLDTMD 111 04455555555666666779*******************************************559****9999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
DGMVRLLIQV VYHVGDDGGG AEGEQQQPHG TVAKGKKSAT ASVPVSALLQ KKGKWKSVSQ 60 AMMEKGFYVS PQQCEDKFND LNKRYKRVND LLGKGTACRV VENQALLDTM DLSSKAKEEA 120 RKLLNSKHLF FREMCAYHNA GVSSTCAAAL SPQIPPPAPS DQQQLCFHHP PGLVDTVLST 180 TKVAIGRRGG GAPAAAEDEG NAEEVDDDDD ADSEDDDDYD DDDGDEDDDD MEDQNHKRHG 240 DHHHQHEEVE EDEDEDSKGF VSGVAGGRKH KRTASQMSAS PPLSLTLSSP SSSMRQLQSE 300 LMAMSGGGEF QQRQWLKRKA AELEEQRVAY QCRAFQLERQ HFKWLRFSTN KERDMERMKL 360 DNERLCLEND RMLLLLRQKE IELTHGGTAA IPSAEQQLIL QNTNTNQRRP AEQPHIPNAD 420 HASTTA

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

DGMVRLLIQV VYHVGDDGGG AEGEQQQPHG TVAKGKKSAT ASVPVSALLQ KKGKWKSVSQ  60
AMMEKGFYVS PQQCEDKFND LNKRYKRVND LLGKGTACRV VENQALLDTM DLSSKAKEEA  120
RKLLNSKHLF FREMCAYHNA GVSSTCAAAL SPQIPPPAPS DQQQLCFHHP PGLVDTVLST  180
TKVAIGRRGG GAPAAAEDEG NAEEVDDDDD ADSEDDDDYD DDDGDEDDDD MEDQNHKRHG  240
DHHHQHEEVE EDEDEDSKGF VSGVAGGRKH KRTASQMSAS PPLSLTLSSP SSSMRQLQSE  300
LMAMSGGGEF QQRQWLKRKA AELEEQRVAY QCRAFQLERQ HFKWLRFSTN KERDMERMKL  360
DNERLCLEND RMLLLLRQKE IELTHGGTAA IPSAEQQLIL QNTNTNQRRP AEQPHIPNAD  420
HASTTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	2e-47	Trihelix family protein